Research and analysis

HPR volume 15 issues 8, 9 and 10: news (21 June 2021)

Updated 19 January 2022

Inclusion of carbapenemase-producing Gram-negative bacteria in NOIDs weekly reports

Since 1 October 2020, diagnostic laboratories in England have had a duty to report the results of any antimicrobial susceptibility test, and any carbapenem resistance mechanism identified, in respect of the causative agents listed in Schedule 2 of the relevant Regulations (SI 674/2020), where this is known to the operator.

In response to this, weekly totals of Gram-negative species, categorised by carbapenemase mechanism, are now being included in the Causative Agent Notification of Infectious Disease Reports (NOIDs) published by PHE on a weekly basis.

The case numbers presented within these weekly reports cover the most recent 6 weeks only, where cases have been reported by a laboratory through to PHE’s Second Generation Surveillance System (SGSS). Cases are classified by root organism and by one of the ‘big 5’ carbapenemase mechanisms (KPC, VIM, IMP, NDM, OXA-48) as applicable.

As patients may have more than one positive specimen taken, specimens taken from the same patient that yielded growth of the same pathogen and carbapenemase resistance mechanism within a 52 week period from the initial positive sterile site specimen, or screening site specimen, are regarded as comprising the same episode of infection and are being de-duplicated.

The case numbers presented within the weekly NOIDs reports are taken from SGSS and are presented at national level. Publication of more detailed analyses covering the entire notifiable period (October 2020 onwards), including data on additional mechanisms reported to the AMRHAI reference unit, is planned in the coming weeks.

The principal category of carbapenemase-producing Gram-negative bacteria are the carbapenemase-producing Enterobacterales (CPE). The national Framework of Actions to contain CPE sets out a range of measures to help health and social care providers minimise the impact of all such antimicrobial resistant pathogens.

Infection reports in this issue

Laboratory confirmed cases of measles, rubella and mumps, England: January to March 2021.

Laboratory confirmed cases of pertussis in England: October to December 2020.

Laboratory confirmed cases of pertussis in England: annual report for 2020.

Laboratory reports of hepatitis C infections in England and Wales 2019.

Vaccine coverage reports

Pertussis vaccination programme for pregnant women update: vaccine coverage in England, January to March 2021 and 2020 to 2021 annual coverage.

Impact of COVID-19 on routine childhood immunisations: early vaccine coverage data to April 2021 in England.